PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028127636.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family YABBY
Protein Properties Length: 216aa    MW: 23965.3 Da    PI: 7.6124
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028127636.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY225.61.3e-69151802170
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 
                     ++   seq+Cy++Cn Cnt+lavsvP tslfk+vtvrCGhCt+ll vn+       + + hl++++  + ++ l+   + ++   ++e++++   
  XP_028127636.1  15 HHLPPSEQLCYLHCNICNTVLAVSVPCTSLFKTVTVRCGHCTNLLPVNMLGLLLPSTNQLHLGHTFFSPSHNLLQEIPNPTQNFLINETNSTDF- 108
                     67789*****************************************99999998888899999**99998887777777777666666554443. PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                      +  l +   +e+pr+p ++rPPekrqrvPsaynrfik+eiqrika nPdishr+afsaaaknWah+P+ihfgl
  XP_028127636.1 109 GV--LLRGGLDELPRPPVINRPPEKRQRVPSAYNRFIKDEIQRIKARNPDISHRDAFSAAAKNWAHLPHIHFGL 180
                     33..5678999****999******************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MSSSSSSSST LSQEHHLPPS EQLCYLHCNI CNTVLAVSVP CTSLFKTVTV RCGHCTNLLP  60
VNMLGLLLPS TNQLHLGHTF FSPSHNLLQE IPNPTQNFLI NETNSTDFGV LLRGGLDELP  120
RPPVINRPPE KRQRVPSAYN RFIKDEIQRI KARNPDISHR DAFSAAAKNW AHLPHIHFGL  180
LPDQTVKKTT VLQQEGEDVL MQDGFFAPAN VGVSPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45190.17e-73YABBY family protein