PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127638.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

NAC

Protein Properties

Length: 347aa MW: 40526.2 Da PI: 6.4399

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127638.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.6	4e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ k+ + e++ewyfFs++dkky+tg+r+nratk+g+Wkatg+dk++ XP_028127638.1 7 VPPGFRFHPTDEELVDYYLRKKIASTRIDL-DVIKDVDLYKIEPWDLQElcKIGTeEQNEWYFFSHKDKKYPTGTRTNRATKAGFWKATGRDKAI 100 69**************************.9***********954555552555******************************** PP NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrle 129 ++ k++l+g++ktLvfykgrap+g+k+dW+mheyrle XP_028127638.1 101 YV-KHSLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 .8899****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MNTFSHVPPG FRFHPTDEEL VDYYLRKKIA STRIDLDVIK DVDLYKIEPW DLQELCKIGT 60 EEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YVKHSLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETNEN GTPQEEGWVV CRVFKKRMPT VRRMGEHDSP CWYEDQVSFM 180 PDFDSPRRIS QPYNSYHHHY SLKQELQLQY NMPHDPFLQL PQLESPKLAQ PSESCNSVAP 240 YGLDRNNNGS TLQSSTLTQD ETFLQSNQPN IQAVDQLTDW RVLDKFVASQ LSQEDASKEN 300 NNNYSNSASF QVGEEHMNML LNDSKRQDIN SEYASISNPT CPIDLWK

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MNTFSHVPPG FRFHPTDEEL VDYYLRKKIA STRIDLDVIK DVDLYKIEPW DLQELCKIGT  60
EEQNEWYFFS HKDKKYPTGT RTNRATKAGF WKATGRDKAI YVKHSLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETNEN GTPQEEGWVV CRVFKKRMPT VRRMGEHDSP CWYEDQVSFM  180
PDFDSPRRIS QPYNSYHHHY SLKQELQLQY NMPHDPFLQL PQLESPKLAQ PSESCNSVAP  240
YGLDRNNNGS TLQSSTLTQD ETFLQSNQPN IQAVDQLTDW RVLDKFVASQ LSQEDASKEN  300
NNNYSNSASF QVGEEHMNML LNDSKRQDIN SEYASISNPT CPIDLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-160	NAC family protein