PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028127658.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 247aa MW: 28108.6 Da PI: 6.2455

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028127658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.3	4.8e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l++ + G +W+++++ g++R++k+c++rw +yl XP_028127658.1 14 KGPWTAEEDKKLINFILTNGQYCWRAVPKLAGLRRCGKSCRLRWTNYL 61 79****************99**********************97 PP
2	Myb_DNA-binding	54	3.9e-17	69	111	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 T+ E++l +d++++lG++ W++Ia++++ gRt++++k++w+++ XP_028127658.1 69 LLTESEEQLVIDLHARLGNR-WSKIASRLP-GRTDNEIKNHWNTH 111 569***************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 247 aa Download sequence
MGRQPCCDKL GVKKGPWTAE EDKKLINFIL TNGQYCWRAV PKLAGLRRCG KSCRLRWTNY 60 LRPDLKRGLL TESEEQLVID LHARLGNRWS KIASRLPGRT DNEIKNHWNT HIKKKLLKMG 120 IDPVTHEPLA NKESNPTEPS SNSELSRETN SNNQEQFQET SKVIIPSLEK KYSSDSSTEN 180 CYDDPLMGCL WGDESWEFPA SGHSFSDISL PSLDESCAWL LDCQDFGVHD FGVDCFNDVN 240 VMNTLNT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G22680.1	1e-89	MYB family protein