PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028547465.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 175aa MW: 19294.9 Da PI: 10.1373

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028547465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	87	1.8e-27	59	108	2	51
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 pr+rWt+ LH+rF++ave LGG+e+AtPk +l+lm+vk Ltl+hvkSHLQ XP_028547465.1 59 PRMRWTKSLHARFIHAVELLGGHERATPKLVLDLMNVKNLTLSHVKSHLQ 108 9************************************************9 PP
2	Myb_DNA-binding	47.1	5.6e-15	60	108	1	45
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwq 45 r+rWT+ ++ ++++av++lGg+ t+k++ m+ k++tl ++ks++q XP_028547465.1 60 RMRWTKSLHARFIHAVELLGGHeraTPKLVLDLMNvKNLTLSHVKSHLQ 108 89*********************************************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MLLPMTTTDA AVATAVEPTL SLGFEPTIAM APQHNSQIHH ESTRNSRTSH GGRRSIRAPR 60 MRWTKSLHAR FIHAVELLGG HERATPKLVL DLMNVKNLTL SHVKSHLQFV YGILMLLQMY 120 RTVKSADRGG LAGQEEELRQ SYLGLNQWSE VDGGHSATNS SHPLSATTPS YTSTS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42630.2	3e-36	G2-like family protein