PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028547600.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YC
Protein Properties Length: 98aa    MW: 11176.2 Da    PI: 10.3166
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028547600.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC103.31.6e-322861295
           NF-YC 12 katdfknhelPlarikkilkad.edvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdi 95
                    ++ dfk  +  l  ikki+kad +dv+mi+aeaP++l++ace+fi+elt r+w ha +nkrr l+k+diaa+++rt+++dfl + 
  XP_028547600.1  2 QTRDFKYIASLLLVIKKIMKADrKDVRMIAAEAPIVLTRACEMFIFELTRRAWAHAVQNKRRILQKNDIAAVLARTNMYDFLAES 86
                    56789988888999*******9569*********************************************************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MQTRDFKYIA SLLLVIKKIM KADRKDVRMI AAEAPIVLTR ACEMFIFELT RRAWAHAVQN  60
KRRILQKNDI AAVLARTNMY DFLAESMEDI GGPSSTTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54830.36e-33NF-YC family protein