PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028547608.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family FAR1
Protein Properties Length: 341aa    MW: 39513.4 Da    PI: 4.7302
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028547608.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR151.82.7e-1671145277
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwe 77 
                      Y++Y++++GFsvrk+++++  ++++ ++++fvCsk g+++  + +  +++ +r+ trtgC a+++ + ++ g w+
  XP_028547608.1  71 AYRSYGYNLGFSVRKDHHSYWPNSKNLKSKDFVCSKAGFKKLPDLN-IQRKYRRSDTRTGCPAMVRFTVDEAGYWK 145
                     59*****************************************999.999999****************9999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    
MPMKMEIDLE EDVGFYEQTI FSQVSEEADN LENADVPETN AHEAEHVEPV GLDEKFSISD  60
VYVNEKEAYE AYRSYGYNLG FSVRKDHHSY WPNSKNLKSK DFVCSKAGFK KLPDLNIQRK  120
YRRSDTRTGC PAMVRFTVDE AGYWKAEDRH LLRSCRNMCD EKASVLKAMT DAGIRTIDAF  180
SFLADEVGGV ENIGFTRRDA YNFIQKIKRA KIELGDTNTL IELFKERQLN DNMFSWDVQK  240
DEFDRLLNFF WVDAIGKIDY DCFGDVVIFD TSYRLNKYNL VCAPFVGVNN HWQNILLGVA  300
FLSEETIESF TWVFTTFVRM MGDKQPITIY TDQTESRPAH G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-43FAR1 family protein