PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028547672.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family C2H2
Protein Properties Length: 138aa    MW: 15386.9 Da    PI: 9.9776
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028547672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.62.2e-052853123
                    EEET..TTTEEESSHHHHHHHHHH.T CS
         zf-C2H2  1 ykCp..dCgksFsrksnLkrHirt.H 23
                    y+Cp   C k + + + L+ H+r+ H
  XP_028547672.1 28 YVCPfaGCEKAYIHEYKLNLHLRKeH 53
                    9***********************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 138 aa     Download sequence    
MVELRPHEKP NNAAKAPVLN SASSDRPYVC PFAGCEKAYI HEYKLNLHLR KEHPGHNPEE  60
GYKTALMTAA STGSACVGEP KIEQLSIRIP VIIPRSPFFH SACSLLQILF VTLPIVQRAY  120
QKLTSSTRMI GYKKKGKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G06634.23e-17C2H2 family protein