PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028547679.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 317aa MW: 35952.1 Da PI: 6.9694

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028547679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	41	4.2e-13	193	252	3	62
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 + k+ +r+ +NR +ArrsR+RK++ +e L e v L++eN + l+ ++++ + ++e XP_028547679.1 193 DQKKRKRMLSNRQSARRSRERKQKHVEDLIEQVSLLKKENGQILTILNLTRQNYVSFEAE 252 6799*************************************9998888888777666665 PP

Sequence ? help Back to Top
Protein Sequence Length: 317 aa Download sequence
MLLRPPTSSL RPPTSSLRPK ISSTPLRHQS KAEDLANSSL NPSSESRSSS TSTFYDPSGA 60 EESVSQRVAA LTREIEEIKN VQNEMQVELR FYRDENQKNK EQEQPHASPD SEDTEENYLL 120 KSPVFTADDV RQYAGGLTTG KSFGYDRRST AGKSPADYAV RTTITIPATA ASYSTGTPSV 180 SSSQETDLLP EMDQKKRKRM LSNRQSARRS RERKQKHVED LIEQVSLLKK ENGQILTILN 240 LTRQNYVSFE AENSVLRTQM MELTSRLNSL NEIVQNMNFY GNTSEPHMMI PDNFINLWSF 300 LCKNQPIMAS SEMIQFY

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	208	215	RRSRERKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75390.1	2e-30	bZIP family protein