PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028547754.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 128aa MW: 14939 Da PI: 10.6215

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028547754.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	95.3	4.8e-30	22	75	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rW++eLH+rFv+av++LGG+ kAtPk+il lm+v+gL ++hvkSHLQ+YR+ XP_028547754.1 22 PRIRWSNELHNRFVRAVDSLGGQTKATPKRILLLMGVNGLNISHVKSHLQMYRS 75 8****************************************************7 PP
2	Myb_DNA-binding	45.1	2.3e-14	25	74	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW+ e++ ++v+av lGg t+k+I mg +g+ ++ks++q+y+ XP_028547754.1 25 RWSNELHNRFVRAVDSLGGQtkaTPKRILLLMGvNGLNISHVKSHLQMYR 74 9***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 128 aa Download sequence
MMMMMEVSEK RRVRQYNRSE APRIRWSNEL HNRFVRAVDS LGGQTKATPK RILLLMGVNG 60 LNISHVKSHL QMYRSMSNSH SDLSNFQFSK GHCLQNISDQ CNHNFLEDSW KKSTSNSKIY 120 SFKWNADG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-25	G2-like family protein