PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028547785.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 88aa    MW: 10340.8 Da    PI: 7.3422
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028547785.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM104.51.4e-32588185
             NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWka 85
                    lppGfrFhPtdeel+v+yL++++ + ++++  +i++++iyk++Pw+Lp k + +e ewyfF++rd+ky++g r+nrat+sgyWka
  XP_028547785.1  5 LPPGFRFHPTDEELIVYYLRNQAMSLPCPA-PIIPQLNIYKFDPWELPGKSELSEGEWYFFTPRDRKYPNGLRPNRATASGYWKA 88
                    79***************************9.88***************88888999***************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    
MGYELPPGFR FHPTDEELIV YYLRNQAMSL PCPAPIIPQL NIYKFDPWEL PGKSELSEGE  60
WYFFTPRDRK YPNGLRPNRA TASGYWKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.13e-49NAC family protein