PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028547871.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family BES1
Protein Properties Length: 172aa    MW: 19745.7 Da    PI: 5.431
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028547871.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF82292.31.1e-28591622107
          DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqs 96 
                     g++r+++ +E+E++k+ ER+RRai+a+i+aGLR++ ny+l++raD+n+V++AL+reA    + +G  + + s ++   e    s++  + ss ++
  XP_028547871.1  59 GGRRSRPKEEKERTKLWERHRRAITARILAGLRRHNNYNLRVRADINDVIAALAREAVDGEKSNGHEWNRRSTRN--GEGYLLSERDPVFSSDHE 151
                     7899*****************************************************988899999998877777..666666666666666665 PP

          DUF822  97 slkssalaspv 107
                     ++ s++ a p 
  XP_028547871.1 152 KIPSKYRAIPS 162
                     66655554444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MERLGGTSEE DDMEMDLEVK EEDDDDERSR TLVAAEEMGG GFFEEEAASS EQIHIHGMGG  60
RRSRPKEEKE RTKLWERHRR AITARILAGL RRHNNYNLRV RADINDVIAA LAREAVDGEK  120
SNGHEWNRRS TRNGEGYLLS ERDPVFSSDH EKIPSKYRAI PSKYTEKISS ST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45880.15e-27BES1 family protein