PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028547980.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 120aa    MW: 13312.7 Da    PI: 4.5443
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028547980.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY54.13.2e-171392259
                    EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY 22 rsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
                    r+YYrC+s+ gCp++k+vers+ dp+++++tY++eHnh+
  XP_028547980.1  1 RGYYRCSSSkGCPARKQVERSRADPTMFIVTYSSEHNHP 39
                    89*****998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
RGYYRCSSSK GCPARKQVER SRADPTMFIV TYSSEHNHPW PPVHKKTKPA EEPKPVEPSV  60
AEPASDPEEK FSDLIGEEPS LLIHDDFRWP PSNSSATADE DDGLLYGPLF VGAPLSDDCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29280.11e-22WRKY family protein