PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028548138.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 211aa    MW: 23847.8 Da    PI: 5.0209
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028548138.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH28.23.3e-09101148455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR+riN+++  L++l+P +     k +  a++L + ++Y++sLq
  XP_028548138.1 101 SHSLAERVRRERINEKMRCLQDLVPGC----YKTMGMATMLDEIINYVQSLQ 148
                     8*************************9....356999**************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MDFAELSENG AMENTSLDFI SVLANADSLL SDVQPEELNL PFAHDLPSFP PFEEMPRNLE  60
DRSKRRKQCL KESASSRNSK DGEKQKEVVH VRARRGQATD SHSLAERVRR ERINEKMRCL  120
QDLVPGCYKT MGMATMLDEI INYVQSLQNQ VEFLSMKLSA ASSFYDFNLA VESMAATQQI  180
GNAHREARDT EKLERCESYG GLTGFNSALP F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G18400.11e-52bHLH family protein