PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028548324.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

GATA

Protein Properties

Length: 101aa MW: 11573.2 Da PI: 10.1885

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028548324.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	54.5	1.6e-17	30	64	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 Cs+C + Tp+WR gp g+ktLCnaCG+++++ +l XP_028548324.1 30 CSHCLSQRTPQWRTGPLGPKTLCNACGVRFKSGRL 64 *******************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 101 aa Download sequence
MEKNENKPET EDEEKGINGR GVQHQQPKRC SHCLSQRTPQ WRTGPLGPKT LCNACGVRFK 60 SGRLLPEYRP AKSPTFVNYK HSNSHKKVME MRMADFSTNS I

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60530.1	2e-38	GATA family protein