PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028548486.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family HB-other
Protein Properties Length: 103aa    MW: 11680.7 Da    PI: 10.3987
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028548486.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox21.15.3e-0737573656
                    HCTS-HHHHHHHHHHHHHHHH CS
        Homeobox 36 klgLterqVkvWFqNrRakek 56
                    k+ ++ +qV +WFqNrR+ ++
  XP_028548486.1 37 KMIVQPKQVLNWFQNRRYAHR 57
                    347899***********9887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MEACLQDVNN LSNSIPPRET ICVLAEKFST SAGRAGKMIV QPKQVLNWFQ NRRYAHRAKV  60
KDPAKLNVSL MPRDDPAQHR NVAPPLPISQ GYFVKYILFA LFL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18380.21e-19HB-other family protein