PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028548588.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 232aa MW: 26554.9 Da PI: 8.0048

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028548588.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	93.6	1.6e-29	22	75	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 pr+rW++eLH+rFv+av++LGG+ kAtPk+il lm+v+gL ++hvkSHLQ+YR+ XP_028548588.1 22 PRIRWSNELHNRFVRAVDSLGGQTKATPKRILLLMGVNGLNISHVKSHLQMYRS 75 8****************************************************7 PP
2	Myb_DNA-binding	43.5	7.5e-14	25	74	3	48
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 rW+ e++ ++v+av lGg t+k+I mg +g+ ++ks++q+y+ XP_028548588.1 25 RWSNELHNRFVRAVDSLGGQtkaTPKRILLLMGvNGLNISHVKSHLQMYR 74 9***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MMMMMEVSEK RRVRQYNRSE APRIRWSNEL HNRFVRAVDS LGGQTKATPK RILLLMGVNG 60 LNISHVKSHL QMYRSMSNSH SDLSNFQFSK GHCLQNISDQ CNHNFLEDSW KKSTSNSKIY 120 SSASNGMLMD EAISKKGDRD QGSKQKKIIH QMIPAHEGLS WREMDCNLTL SSFDYQKGCE 180 EGRDGSSSIE FDAFDEIPIS QIDSNIASKS LLEDNEINLE LTISSKSYNY RI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	3e-24	G2-like family protein