PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028548677.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 172aa    MW: 19308.8 Da    PI: 5.3766
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028548677.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.61.9e-17390184
             NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewy.fFskrdkkya.tgkrknr..atksgyWk 84
                    lpp+fr hPtdeel+++yL +k+ ++++++ ++i++v+++k+ePwdLp k +++++k  y  + ++d++   +++ ++r  +++++ W 
  XP_028548677.1  3 LPPCFRLHPTDEELITHYLSNKLLNSSFDA-KAIAQVELNKCEPWDLPsKDIEGDSKGEYpCWNEKDTSLLqRQSSQSRedKVDNSKWV 90
                    79****************************.88***************77787777744426666665544233444442345567775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    
MELPPCFRLH PTDEELITHY LSNKLLNSSF DAKAIAQVEL NKCEPWDLPS KDIEGDSKGE  60
YPCWNEKDTS LLQRQSSQSR EDKVDNSKWV IYRVIEKSLS GKEKGAFGLA KIGSLSSMFE  120
EEMTQGERRA RSFYGGNVFR DKFMASAVRN PAETGLVTVA NTDALKLLAL GL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.12e-20NAC family protein