PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028548687.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NF-YB

Protein Properties

Length: 158aa MW: 18105.8 Da PI: 9.4746

Description

NF-YB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028548687.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YB	125.4	2.2e-39	38	128	4	94
NF-YB 4 qdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrele 94 qd +lP an++rimk +lP nakisk+aket+q+c+sefi f+t+eas kc+ e+r+t+ gdd+++a+ +lG+++y+ + + yl+kyre XP_028548687.1 38 QDFLLPTANIGRIMKVALPPNAKISKEAKETMQDCASEFICFITGEASVKCRMENRQTLCGDDVCHAMKSLGLDEYAIATERYLQKYREHY 128 8999************************************************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 158 aa Download sequence
MHQNSVIFVS TSSRKKMNEI QESNITMPAK VKRRSNVQDF LLPTANIGRI MKVALPPNAK 60 ISKEAKETMQ DCASEFICFI TGEASVKCRM ENRQTLCGDD VCHAMKSLGL DEYAIATERY 120 LQKYREHYKK PEALKNTTPN QIDVRDQLSV YSRSNQQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47810.1	2e-39	NF-YB family protein