PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028548805.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WOX

Protein Properties

Length: 166aa MW: 18637.2 Da PI: 10.9429

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028548805.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.9	5.4e-21	75	134	3	57
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq++ Le+l+++ r+p+a+++e+++++l +++ ++V++WFqN++a+e++ XP_028548805.1 75 TRWNPTQEQIRKLESLYNSgMRTPNAQQIEKITAELikhgRIEGKNVFYWFQNHKARERQ 134 7***************99************************************97 PP
2	Wus_type_Homeobox	114.2	6.7e-37	75	136	4	65
Wus_type_Homeobox 4 tRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 tRW+Pt+eQi+ Le+ly+sG+rtPn+++i++itaeL ++G+ie+kNVfyWFQN+kaRerqkq XP_028548805.1 75 TRWNPTQEQIRKLESLYNSGMRTPNAQQIEKITAELIKHGRIEGKNVFYWFQNHKARERQKQ 136 8***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MKFQQLELAF LNKNSSTSSS SSSSLTLGFK RLRPVVPAAS TVKPVTSLEL KSFSFSKASS 60 APLQHQHVTL SGGGTRWNPT QEQIRKLESL YNSGMRTPNA QQIEKITAEL IKHGRIEGKN 120 VFYWFQNHKA RERQKQKRNG LLSPSLPPDS NFSETKACLY MHTISN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46480.1	5e-37	WOX family protein