PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028549102.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 169aa    MW: 18766.4 Da    PI: 9.6009
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028549102.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.11.7e-0719412447
                     HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding 24 WktIartmgkgRtlkqcksrwqky 47
                     W++Ia  ++  Rt++++k++w+++
   XP_028549102.1 19 WSLIAGLLP-ERTDNEIKNYWNTH 41
                     *********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MNSGGFVRRL TGVSFNHLWS LIAGLLPERT DNEIKNYWNT HIKRKLFSRG IDPQTHHPIT  60
AATAAFLTLP EIFSPVLETA DTSDNKCHSD SCSGGGSPNY VDLNLDLSTN KPPLLKKLVL  120
ARDPQKVKGS LLATDTVNSE VRDGDAMCPA KKRIQHLTPR FYRRSHQCG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.16e-21MYB family protein