PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028550016.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 174aa    MW: 19729.3 Da    PI: 9.8888
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028550016.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.40.000291035530
                    HHHHHHHHHHHHHHHHHHHHCTSCCC CS
             HLH  5 hnerErrRRdriNsafeeLrellPka 30
                     + +E+ RR +++    +L  l+P++
  XP_028550016.1 10 RKTVEKLRRMQMKALCLKLANLIPQD 35
                    5789********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MKGGEGKMDR KTVEKLRRMQ MKALCLKLAN LIPQDYLSKV FIQLFIHSVH QLVLSIFPLT  60
HTHSLDLYPP NNLLRCSDIS SICREGEILE FKFPVVEVRH QDQNLEVLLI SSLKKRIALH  120
EVIRIVEDGG ADVVNASFSI VGNKIIHTIH CQAISSRIGL DASKVSKRLL QLIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10585.14e-14bHLH family protein