PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028550055.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 234aa    MW: 26031.4 Da    PI: 7.3894
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028550055.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH20.31e-0632631954
                    HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +f+ Lr llP++     +K +Ka+ L +++eYI+ L
  XP_028550055.1 32 RFQVLRGLLPNS----EQKRDKASFLLEVIEYIRFL 63
                    79*********8....7*****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MIGGLVCGEA RRSREASSLP HLPQFQSPPK MRFQVLRGLL PNSEQKRDKA SFLLEVIEYI  60
RFLHEKVQKY ESIYPGWIDE NTKLLAWNNH QDSGDNIGDA SIIKNGSAPG FVLSEADNLA  120
SHFQWMRASN PGDCAISNDM LDELTIDEGT ISVSCAYSQG LLNNLSEALQ NSGIDLSRAS  180
VSVQINLGRK SGGRSSKPSL SSKLGWRYYC FSTLYQGACL LAWAFRQKHS ECYC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69010.18e-39bHLH family protein