PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028550689.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 182aa    MW: 20153.7 Da    PI: 9.6074
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028550689.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.67.4e-1982130254
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     +y+GVr+++ +g+W+AeIrdp+    r  r +lg+f+tae+Aa a+++a+ +++
  XP_028550689.1  82 KYRGVRRRP-WGKWAAEIRDPR----RgIRKWLGTFDTAEQAASAYDKAAIEFR 130
                     8********.**********83....46**********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MELKPSTRRL LSAERENSIL VNSLIHVLSG KHDYAAPAIS FPLADNCKLC RVEGCLGCDF  60
LQESAHGSGE SRKRLCAKKK NKYRGVRRRP WGKWAAEIRD PRRGIRKWLG TFDTAEQAAS  120
AYDKAAIEFR CARDKLNFPI VDQVTVDSSG RSTKSDCSGS GSDDDSAQER GDGAAMKFNQ  180
RG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-31ERF family protein