PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028550790.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 163aa    MW: 17755.2 Da    PI: 8.6627
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028550790.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH253.5e-081151551055
                     HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     r +R+++ +a+  L   lP+      +  + a+iL k+++YIk+L+
  XP_028550790.1 115 RIYRAKVAEAIKALNNALPNT-----ETGNQASILDKVIDYIKYLK 155
                     89******************8.....579***************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MKRPSLCDTG ASRVNQLMPI VHPLDSQALN SLSNSLCLAA KVEGLEDFSS SRIGYPLTNT  60
HGEQASILNN VAYEEPAEIG VLMKPKSKHY SSAAQQVEET IATKKDGSSK VISSRIYRAK  120
VAEAIKALNN ALPNTETGNQ ASILDKVIDY IKYLKHRLNV SDI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24260.11e-08bHLH family protein