PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028551177.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 205aa    MW: 23183.1 Da    PI: 8.788
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028551177.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM145.92.1e-4561362128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdke 91 
                      pGfrF Pt+eel+++yL++k+++ + ++e+vi+ +d++++ePw+Lp+     +v +++++w+fF+++++++a+g r++r+t++gyWkatg+  +
  XP_028551177.1   6 LPGFRFYPTEEELLSFYLHNKLNNLRSDMERVIPVADVFSHEPWQLPElsgepCV-QDKEQWFFFCPQQEREASGGRPSRTTTTGYWKATGSPIP 99 
                     59***************************99****************64666433.3677*********************************** PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     ++s++++  g+kkt+vfy+grap+gekt+W m+eyrl
  XP_028551177.1 100 IYSSTKHRLGMKKTMVFYNGRAPTGEKTKWKMNEYRL 136
                     ***********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    
MSSFQLPGFR FYPTEEELLS FYLHNKLNNL RSDMERVIPV ADVFSHEPWQ LPELSGEPCV  60
QDKEQWFFFC PQQEREASGG RPSRTTTTGY WKATGSPIPI YSSTKHRLGM KKTMVFYNGR  120
APTGEKTKWK MNEYRLFDDH ATTSTAAAAA SALRAEFSLC RLYTGSGSLR SFDRRPPATD  180
DPASTSELRL PEGGATELGK KPRLV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22380.16e-69NAC family protein