PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028551654.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

NAC

Protein Properties

Length: 280aa MW: 32508.6 Da PI: 5.8811

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028551654.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.3	3.5e-54	7	134	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdee++++yL +k+++++++ +i e+ +++ePwdLp k+k +ekewyfF+++d+ky+tg r+nrat++gyWkatgkdk++++ XP_028551654.1 7 LPPGFRFHPTDEEIITHYLFQKIADRNFKS-IAIGEASFNESEPWDLPGKAKMGEKEWYFFCQKDRKYPTGMRTNRATATGYWKATGKDKKIFKG 100 79***********************999.88***********99999************************************** PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg +vg+kktLvfy+gra +g+kt+Wvmheyrle XP_028551654.1 101 KGVHVGMKKTLVFYRGRALRGQKTNWVMHEYRLE 134 ******************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 280 aa Download sequence
MDESLFLPPG FRFHPTDEEI ITHYLFQKIA DRNFKSIAIG EASFNESEPW DLPGKAKMGE 60 KEWYFFCQKD RKYPTGMRTN RATATGYWKA TGKDKKIFKG KGVHVGMKKT LVFYRGRALR 120 GQKTNWVMHE YRLEGTQHQY CNLSYYTDEW VVCKVYHKKN SEISTTVESE ERMNPSSSVD 180 DDLSVETNYF PPLTNSLYLK NSSSKFMEDT NEPGNEMIPS MLFELMRPES MVMSYNLPDT 240 GICSERNIEK NIDSFQSHDH DPCAAVQAVD FDGLWDYGLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18270.2	5e-86	NAC family protein