PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028551699.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 217aa    MW: 24417 Da    PI: 4.2137
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028551699.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.43.6e-181262155
             AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta +Aa a++ a+++++g
  XP_028551699.1 12 CSYRGVRQRT-WGKWVAEIREP---N-RgNRLWLGTFATALKAAYAYDLAARAMYG 62
                    67*****999.**********8...2.359***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 217 aa     Download sequence    
MRGKGGPENS KCSYRGVRQR TWGKWVAEIR EPNRGNRLWL GTFATALKAA YAYDLAARAM  60
YGPGARLNFS VDQIPSPSES YSSTITTREE TREEANTELN DWLNLTEDLS CENFDVDEML  120
RMMDAEPGNT GITTEPDTED ITHCCSPCHM TSPSTLSFQL QNPDAKLLGA LDHMENETSD  180
TDFSYDFIRP MRQELDYWPP GNPELFDLGF TDGGGLF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.13e-26ERF family protein