PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028551947.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 226aa    MW: 25671 Da    PI: 9.5808
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028551947.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP231.44.7e-10106146148
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48 
                     +  +GV++  k+ +W A I++      +k+++lg+ g+ e+Aa+++++
  XP_028551947.1 106 CVMRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEDAARLYDR 146
                     568***99..47*********4.....5******************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MVSLRRRRLL GLCSGKSSIP VELPGSNESS GALNLSRNVN PFSIHPMPLI SISREKPTNI  60
HEISFGSSVV SATSSPKEEI DNYFPGKDMK HRKRYRRKLY EDQEPCVMRG VYFKNMKWQA  120
AIKVDKKQIH LGTVGSQEDA ARLYDRQPNF ELPEEEKHEL SHYNWEEFLA ITRNAINHKK  180
LQRRIGGGRR RKSGIEMRGS DVEEPERGAC GSPSTSDDGE VEVFAS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.24e-34ERF family protein