PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028552001.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

GRF

Protein Properties

Length: 198aa MW: 21506.6 Da PI: 9.4937

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028552001.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	81.4	8.2e-26	129	173	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 ++epgrCrRtDGKkWRCsr+v++++k+CErH+hrgr+rsrk++e+ XP_028552001.1 129 EPEPGRCRRTDGKKWRCSRDVVPNQKYCERHMHRGRNRSRKTGEA 173 69***************************************9886 PP
2	QLQ	53.3	8.7e-19	64	99	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 FT +Q q+L++Q+l+yKy+a ++PvP +L+++i+k XP_028552001.1 64 IFTFMQMQELEHQALIYKYMAGGLPVPLHLVLPIWK 99 6**********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 198 aa Download sequence
MATKEHTSFH SNTPPFLPPS KIPRLSSYPT SQEAAAMASP SPLTLGLQLG LNGSSVSSPP 60 KKPIFTFMQM QELEHQALIY KYMAGGLPVP LHLVLPIWKS VAAANCGGRH YPPFLGCGDL 120 CLDYRNSLEP EPGRCRRTDG KKWRCSRDVV PNQKYCERHM HRGRNRSRKT GEAGGSGGGG 180 GGGDGEDFHQ LMPGVPIP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-29	GRF family protein