PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028552321.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family MYB_related
Protein Properties Length: 118aa    MW: 13477.4 Da    PI: 4.9968
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028552321.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.57.3e-092064345
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwq 45
                      WT e  +l+ +a + +  +   +W+++a+ +g g++++++k ++ 
   XP_028552321.1 20 TWTSEQNKLFERALAVYDEEtpeRWEKVASAVG-GKSAEEVKIHYE 64
                     7*****************99*************.**********95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 118 aa     Download sequence    
LLLLLLLLEE LMESRESGST WTSEQNKLFE RALAVYDEET PERWEKVASA VGGKSAEEVK  60
IHYELLVEDL KHIESGSVPL PNYKFSGSGR KSTDKEKRFF VSNSSAFSLL FLLLRWPV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.16e-35MYB_related family protein