PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028552637.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family WRKY
Protein Properties Length: 176aa    MW: 20706.4 Da    PI: 8.4667
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028552637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY612.1e-1948109359
                     -SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-S..SSTTEEEEEEES--SS- CS
            WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversa..edpkvveitYegeHnhe 59 
                     Dg++WrKYG K++ +sefpr+YYrC++    gC+++k +++++  ++p   ++tY+ +H+++
  XP_028552637.1  48 DGHQWRKYGEKHISNSEFPRNYYRCSHFkeqGCHATKTIQQKEgnDEPPKYIVTYKMHHTCK 109
                     9*************************977789********98622578899*********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    
MEIYNTTSFR FPPNIVSWLL CFYLKERKSH CREEQKSWSI VTPAPHFDGH QWRKYGEKHI  60
SNSEFPRNYY RCSHFKEQGC HATKTIQQKE GNDEPPKYIV TYKMHHTCKS MVPIYSLFLE  120
STTQSAPIIS FAPGNTPHNK QTETYKDEND FKKHDQIISS SNVPMLIDLN LTIESK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G22570.13e-17WRKY family protein