PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028552733.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Nin-like
Protein Properties Length: 92aa    MW: 9959.38 Da    PI: 10.4601
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028552733.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK69.45e-224591349
          RWP-RK  3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRki 49
                     +++++d+ k+Fslpi++AA+ Lgv+ +vLKriCR++GI RWP+Rk+
  XP_028552733.1 45 GKLTINDITKFFSLPIAEAASILGVSDSVLKRICRENGIVRWPYRKV 91
                    5799******************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MYFTSGAEPS SHQTRLPENP ESGGKAVSLP GANHPSLRPP PTRSGKLTIN DITKFFSLPI  60
AEAASILGVS DSVLKRICRE NGIVRWPYRK VG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53040.13e-11Nin-like family protein