PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028553374.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 337aa MW: 35741.4 Da PI: 7.0358

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028553374.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	67.7	1.9e-21	230	291	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN +L+ e++++kke ++l + XP_028553374.1 230 ERELKRQKRKQSNRESARRSRLRKQAECEELAHRVEVLKEENASLRAEVNRIKKEHEQLILQ 291 89*******************************************************99655 PP

Sequence ? help Back to Top
Protein Sequence Length: 337 aa Download sequence
MPPYGTPPPY VMYPHGGIYA HPPMAPGSLP FSPYAMASPN GNAEASGAFP GSEAEGKSSE 60 GKEKSPIKRS KGSLGSLNLI TGKNSELGKN SAASGNGAYS QSGDSGSEAS SEGSDANSQN 120 DSPQKTGDAQ NSSDAITHQN GNYAHGTTAH GLQNGTARGS AQSMVGQTMA IVPMPTGTVT 180 GPTTNLNIGM DFWGATNPST IPPIHGKVPA TAVATPMIPG ATSELWMQDE RELKRQKRKQ 240 SNRESARRSR LRKQAECEEL AHRVEVLKEE NASLRAEVNR IKKEHEQLIL QNASLKERLG 300 EIPKGTKELS HENPAEDYLE QNLDSDGKGR EADAGRK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	247	253	RRSRLRK
2	247	254	RRSRLRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35530.1	2e-90	bZIP family protein