PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028553427.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 125aa MW: 14162.1 Da PI: 10.6914

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028553427.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	98.7	4.2e-31	45	98	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +F +ave+LGG+++AtPk +l+lm++ gL+++hvkSHLQ+YR+ XP_028553427.1 45 PRLRWTPDLHMCFARAVERLGGQDRATPKLVLQLMNIRGLSITHVKSHLQMYRS 98 9****************************************************7 PP
2	Myb_DNA-binding	49.2	1.2e-15	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +++av++lGg t+k++ + m+ g++ ++ks++q+y+ XP_028553427.1 46 RLRWTPDLHMCFARAVERLGGQdraTPKLVLQLMNiRGLSITHVKSHLQMYR 97 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 125 aa Download sequence
MGSEASSIES ANPNSSNMEE EDEERESKNP KSSGSVRQYN RSKAPRLRWT PDLHMCFARA 60 VERLGGQDRA TPKLVLQLMN IRGLSITHVK SHLQMYRSKR IDGSGQVPSI IKNLKDKNLS 120 MKHKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40260.1	3e-39	G2-like family protein