PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028553615.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

TCP

Protein Properties

Length: 223aa MW: 24983 Da PI: 9.9773

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028553615.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	115.9	5.3e-36	19	113	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssg........ 88 + +kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai+el++ s +++ +++e+s+s++ + ++ XP_028553615.1 19 TSRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLMKNAKAAIDELVSASIKKN-IAKPEASVSASLTLAEPpnspqnir 112 679*************************************************************44444.2222222222221111111122222 PP TCP 89 k 89 XP_028553615.1 113 L 113 2 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MKYAGEIVEV QGGHIVRSTS RKDRHSKVCT AKGPRDRRVR LSAHTAIQFY DVQDRLGYDR 60 PSKAVDWLMK NAKAAIDELV SASIKKNIAK PEASVSASLT LAEPPNSPQN IRLSLQSSQA 120 GIFTDQNPVF FLNSDLSEQN QRMASRNDVV FGRGQFFTQR EPLQSSNLPV FRPWTETMDR 180 EAHYPSSSSI GFSGFRIPAR IQGEEELDSI SYKLSSRSSS SYH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	4e-45	TCP family protein