PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028553714.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

G2-like

Protein Properties

Length: 265aa MW: 29963.8 Da PI: 6.8054

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028553714.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	99.4	2.4e-31	77	131	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt eLHerFv+av++L G+ekAtPk +l lm+ +gLt++h+kSHLQkYRl XP_028553714.1 77 KPRLRWTLELHERFVDAVNKLDGPEKATPKGVLMLMNTEGLTIYHIKSHLQKYRL 131 79****************************************************8 PP
2	Myb_DNA-binding	55	1.8e-17	79	130	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT e++e++vdav++l g+ t+k + m+ +g+t +++ks++qky+ XP_028553714.1 79 RLRWTLELHERFVDAVNKLDGPekaTPKGVLMLMNtEGLTIYHIKSHLQKYR 130 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 265 aa Download sequence
MSLMEQMDLQ ILSEQLGIAI TDNGDCPSLD DIYETPQSSG FPSFQSGFLQ AHEKLSTPAK 60 VRTHSSYSTS GSLSIVKPRL RWTLELHERF VDAVNKLDGP EKATPKGVLM LMNTEGLTIY 120 HIKSHLQKYR LAKFLPDTIE DKKASHAEDT REISSSHDSD TALKRNIQVT EALRIQMEVQ 180 KMLHEQLEVQ RSLQLRVEEH SRYLQKIIEE QQNTTNSLVS SNQNQALKSQ TESSDQSSPV 240 RPAGSISSPT KDKDLVTEFK KRKVQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	4e-67	G2-like family protein