PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028553855.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family G2-like
Protein Properties Length: 283aa    MW: 31483.3 Da    PI: 9.308
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028553855.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like92.53.4e-29107163255
         G2-like   2 prlrWtpeLHerFveaveqLGGsek...AtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     pr+rWt++LH+rFv+ave LGG+e    AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
  XP_028553855.1 107 PRMRWTTTLHARFVHAVELLGGHESmfgATPKSVLELMDVKDLTLAHVKSHLQMYRT 163
                     9**********************96666****************************7 PP
2Myb_DNA-binding48.81.7e-15108162148
                      TSSS-HHHHHHHHHHHHHTTTT......-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg......tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r+rWTt ++ ++v+av++lGg+      t+k++ + m  k +tl ++ks++q+y+
   XP_028553855.1 108 RMRWTTTLHARFVHAVELLGGHesmfgaTPKSVLELMDvKDLTLAHVKSHLQMYR 162
                      89***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MQVEEFFTET TNSMPSPNLS LSISVDSPQP QTELSLSSSS SPPLEELRKA SKSIKGIPIY  60
SNNTSSSNSS FPLLPKMPSY SAQNQYNTTL RSRLMWRLPV RRSMRAPRMR WTTTLHARFV  120
HAVELLGGHE SMFGATPKSV LELMDVKDLT LAHVKSHLQM YRTVKTTEKA AASSGQSDGS  180
GEEDLTRDLG FGRLMDSRGS NQTMTVHDMD YTSAKRSNSS SRGIWLHSIP NEIDENRSEN  240
LSAKVEVNDL SSPSVSPKAV KESINPSLEF TLGRPDWQSK KQD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G16560.15e-44G2-like family protein