PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028554810.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family HB-other
Protein Properties Length: 171aa    MW: 19993.2 Da    PI: 6.8185
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028554810.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox253.3e-081201532154
                     HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
        Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                     k +yp+++++++L +++gL+ +q+ +WF N+R +
  XP_028554810.1 120 KWPYPTEDDKARLVRETGLPLKQINNWFINQRKR 153
                     569*****************************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MTSEKFYVLK HNFVGVSSGE GIGATMSDDD DDDDQDESET NFFDVNFDGS NFMGFGPLMP  60
TESERTLMER VRQELKQELK IGYKEKIVDI REEIQRKRRA GKLPGDTTST LKEWWQSHSK  120
WPYPTEDDKA RLVRETGLPL KQINNWFINQ RKRNWHSNPS SSTTLKSNRK R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25220.21e-82TALE family protein