PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028554852.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

GRF

Protein Properties

Length: 201aa MW: 22436.2 Da PI: 9.6975

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028554852.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.4	1.4e-24	82	125	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs++++ ++k+CErH+hrg++rsrk++e XP_028554852.1 82 DPEPGRCRRTDGKKWRCSKEAYLDSKYCERHMHRGKNRSRKPVE 125 79***************************************997 PP
2	QLQ	61.1	3.1e-21	11	46	2	37
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FTa+Q+q+L++Q+l+yKy+a++ P+P++L+++i++ XP_028554852.1 11 PFTASQWQELEHQALIYKYIASGIPIPSDLILPIRR 46 9*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 201 aa Download sequence
MMSGSGGSRY PFTASQWQEL EHQALIYKYI ASGIPIPSDL ILPIRRSFLL DSTATSPSLA 60 FPTQAQLGWS CFQMGFGKKA EDPEPGRCRR TDGKKWRCSK EAYLDSKYCE RHMHRGKNRS 120 RKPVEISLSA KTNQSSSSSS PSSAQSPYLA NLSISTPQSN YNLSCPYSNY SRPPWAAHFS 180 ADSGTSHLQL NSDKLFLILH F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	1e-52	GRF family protein