PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028554915.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bZIP
Protein Properties Length: 347aa    MW: 37687.5 Da    PI: 6.5182
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028554915.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_148.51.9e-15275326557
                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                     +r+rr++kNRe+A rsR+RK+a++ eLe++   L+++N +L++e e l+ +++
  XP_028554915.1 275 RRQRRMIKNRESAARSRARKQAYTVELETELNILKEQNARLREE-ELLEAMAK 326
                     79****************************************55.66666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MAASKPVSCK NLAAAVLEVT SDPQEHLEDG AGISTLQPME IAAVFPLVWQ SSIYSRTLDE  60
IQNTVCVPGK NFGSMNMDEF LTNIWNVEDG FDASGPAVQA QYPVEGQPPL NRQGSLSLPS  120
QLCRKTVDEV WAEIHREQQN IDRLKQNNGE ATRKPTFGEM TLEDFLIKAG VVRKGNGLTA  180
CAMEANGAPG LGHLNDGGAL GNVRRGDFYC KTGDAGGGLQ LGMVGSPASP LSADGKGGCY  240
GGVDSYGIGI DGFSEKGCGG RKRMMEGMVE KVVERRQRRM IKNRESAARS RARKQAYTVE  300
LETELNILKE QNARLREEEL LEAMAKQTHH HMDKTSRSLQ RSNSSPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36270.16e-64bZIP family protein