PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028554945.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WRKY

Protein Properties

Length: 151aa MW: 17924.9 Da PI: 6.6773

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028554945.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	60	4.6e-19	63	120	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +D y+W K Gq ++k + rsY++C ++C+++kkv+ ++p+ ++i Yeg+Hnh+ XP_028554945.1 63 EDDYKWIKCGQQNIKRIQKKRSYFKCVNKNCKARKKVDWPPNEPNNIDISYEGDHNHR 120 79*******************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 151 aa Download sequence
MKINSDKEEE ANEKNIAEER NDRMMAIQED AYNWRKYGRD WEHYIHNIKM FRNEEQNRVV 60 IPEDDYKWIK CGQQNIKRIQ KKRSYFKCVN KNCKARKKVD WPPNEPNNID ISYEGDHNHR 120 ALATGHSEND EAGIAANEDD LTTLTLGPTR T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G23320.1	7e-12	WRKY family protein