PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028554988.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WRKY

Protein Properties

Length: 117aa MW: 13894.4 Da PI: 9.0185

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028554988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	67.7	1.7e-21	33	90	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 +D y+WrKYG+K +++ + rsY+rC ++C+++kk+e ++p+ +e+tYeg+Hnh+ XP_028554988.1 33 EDDYKWRKYGKKYIHKIKKYRSYFRCVNKTCKARKKLEWPPNEPNNIETTYEGDHNHR 90 79*******************************************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 117 aa Download sequence
MASSTSTIID QEEEAKEKNI AEERNNRTIT IREDDYKWRK YGKKYIHKIK KYRSYFRCVN 60 KTCKARKKLE WPPNEPNNIE TTYEGDHNHR DRSENEEAGI AANQYDLATQ MFGSART

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64000.1	6e-11	WRKY family protein