PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028555293.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family ERF
Protein Properties Length: 248aa    MW: 26592.4 Da    PI: 9.2281
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028555293.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.32.2e-194796255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +y+GVr+++ +g+WvAeIr+p++   r+r +lg+f taeeAa+a+++a++ l+g
  XP_028555293.1 47 RYRGVRQRS-WGKWVAEIREPRK---RTRKWLGTFSTAEEAARAYDRAALILYG 96
                    59****999.**********954...5**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    
MDSSSNQPSP IEQYPLSHPN SPTSSGSSGG SRKVRRGKGG PDNSKFRYRG VRQRSWGKWV  60
AEIREPRKRT RKWLGTFSTA EEAARAYDRA ALILYGPRAQ LNLQPSSSNS STDGANGRNS  120
SSSSSSTSSS TTTLRPLLPR PTGFPLPILP YSYPTIPYPY PTQLTTGAAV TPPVGVTNMG  180
SEEMNSLVGS MSSGLSISFP PEPPSVEVGS ASMDIPATPS MGGGWGYEDY SMASACFWDD  240
ADPFLFDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40220.17e-29ERF family protein