PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028555596.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family bHLH
Protein Properties Length: 161aa    MW: 17922.4 Da    PI: 6.1109
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028555596.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH17.66.9e-061183855
                    STCHHHHHHHHHHHHHHH CS
             HLH 38 lsKaeiLekAveYIksLq 55
                    +sK ++L+ A++YIk+Lq
  XP_028555596.1  1 MSKESTLTDAIDYIKHLQ 18
                    59***************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MSKESTLTDA IDYIKHLQKQ IVDLQIELST VGTEGGEKQG SSSSTATKAS QDTVRFQGML  60
ELSPMGQNKF YLKVTSEKRN NGFTKLLEDI SQLGLEVNEV SSVSFSGISH GVLCLEVSRC  120
ALVRVEKSSK PLMVLDGERK WHFAHFFLFF FSFDFLAAEQ G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.11e-08bHLH family protein