PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028555611.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NAC
Protein Properties Length: 163aa    MW: 19308 Da    PI: 9.6805
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028555611.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.22e-50241492128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                     +pGfrFhPt+eel+ +yL++kvegk++++ e i+ +d+y+++Pw+Lp+ ++ +ekew+f+++rd+ky++g+r+nr+t+sgyWkatg d+ + +++
  XP_028555611.1  24 MPGFRFHPTEEELIEFYLRRKVEGKRFNV-ELITFLDLYRYDPWELPALAAIGEKEWFFYVPRDRKYRNGDRPNRVTTSGYWKATGADRMIRNEN 117
                     79***************************.89***************8778899***************************************** PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                      + +glkktLvfy+g+apkg +t+W+m+eyrl
  XP_028555611.1 118 FRSIGLKKTLVFYTGKAPKGIRTSWIMNEYRL 149
                     ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MAIAAAMRND EGKDVDGHEH DLVMPGFRFH PTEEELIEFY LRRKVEGKRF NVELITFLDL  60
YRYDPWELPA LAAIGEKEWF FYVPRDRKYR NGDRPNRVTT SGYWKATGAD RMIRNENFRS  120
IGLKKTLVFY TGKAPKGIRT SWIMNEYRLP QSETDRFKKE FAG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.26e-92NAC family protein