PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028555922.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

bZIP

Protein Properties

Length: 401aa MW: 44121.1 Da PI: 6.1533

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028555922.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.9	1.4e-10	216	274	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kvk+L++e ++L +l++l+ l +e+ XP_028555922.1 216 KRAKRIWANRQSAARSKERKMRYIAELERKVKTLQTEATTLSAQLNMLQRDTNGLSAEN 274 9***********************************************98877776665 PP

Sequence ? help Back to Top
Protein Sequence Length: 401 aa Download sequence
MSQGGGGGGS PPDSARYAPF DSITSSFHMK SVTMASSSSQ SLATGASESG IGDTVSTDEK 60 RFSQDISRMP DFPARNISHR RAQSEIISLP DDISFDSDLG VVGCMDGPAL FDDTEEDLFS 120 MYIDLEKFNT SAGTSEEVLQ LGDPSGATAP PAPQQHTGNL ASTLTDKPKF RHHHSHSLDG 180 SASVKSELLE SGLEHADTKK AMSAAKLADL ALVDPKRAKR IWANRQSAAR SKERKMRYIA 240 ELERKVKTLQ TEATTLSAQL NMLQRDTNGL SAENSELKLR LQTIEQQVHL QDAVNDAMRE 300 EVQILKLVTG QMTPNASMMN FEPSFGANLQ LYNHNQSMQS LIAAHQLQQL QIHSQHQQQF 360 HPRQQQQQQQ QPLPAEVRMK GTMVSQTSRE GIYEANNTNK E

Sequence ? help Back to Top

Protein Sequence Length: 401 aa Download sequence

MSQGGGGGGS PPDSARYAPF DSITSSFHMK SVTMASSSSQ SLATGASESG IGDTVSTDEK  60
RFSQDISRMP DFPARNISHR RAQSEIISLP DDISFDSDLG VVGCMDGPAL FDDTEEDLFS  120
MYIDLEKFNT SAGTSEEVLQ LGDPSGATAP PAPQQHTGNL ASTLTDKPKF RHHHSHSLDG  180
SASVKSELLE SGLEHADTKK AMSAAKLADL ALVDPKRAKR IWANRQSAAR SKERKMRYIA  240
ELERKVKTLQ TEATTLSAQL NMLQRDTNGL SAENSELKLR LQTIEQQVHL QDAVNDAMRE  300
EVQILKLVTG QMTPNASMMN FEPSFGANLQ LYNHNQSMQS LIAAHQLQQL QIHSQHQQQF  360
HPRQQQQQQQ QPLPAEVRMK GTMVSQTSRE GIYEANNTNK E

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06070.1	1e-125	bZIP family protein