PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028555924.1

Organism

Dendrobium catenatum

Taxonomic ID

906689

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium

Family

WOX

Protein Properties

Length: 253aa MW: 27331.7 Da PI: 7.2476

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028555924.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	49.9	5.3e-16	33	93	2	57
T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+R+t+++eq+ +Le+ F++ +p +ee ++ k l ++ +++V++WFqNrR + ++ XP_028555924.1 33 RSRWTPKPEQILILESIFNSgMVNPPREETVRIRKLLekfgSVGDANVFYWFQNRRSRSRR 93 79***************99***********************************997 PP
2	Wus_type_Homeobox	106.3	1.9e-34	33	95	3	65
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 r+RWtP+peQi iLe++++sG+++P++ee+ ri++ Le++G ++d+NVfyWFQNr++R+r++q XP_028555924.1 33 RSRWTPKPEQILILESIFNSGMVNPPREETVRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQ 95 79***********************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 253 aa Download sequence
MDNNKPPEST ASTINPCTSE SPASGTAVSD PIRSRWTPKP EQILILESIF NSGMVNPPRE 60 ETVRIRKLLE KFGSVGDANV FYWFQNRRSR SRRRQRQLQA SLAATTSGAQ AGVATSASCS 120 SSSLDASSLA SSFGSSSSSS SSSSSASVGS VWCESADDLF SISQQMGFGE MKMTTKLCMI 180 FCNTKLTTQN YNAGTVNVFI NGILTEVPRG PIDMRSMFGH DLLMVHSSGE VLPVNEYGVL 240 LQSLQMGESY YLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03660.1	1e-36	WOX family protein