PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028556363.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family NF-YB
Protein Properties Length: 120aa    MW: 13612.7 Da    PI: 5.7999
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028556363.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB161.61.2e-5026117293
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                     reqdr+lP+an+srim+k++P n+ki+k ak++vqecvsefi+f+tseas+kc rekrktingdd+l a+ tlGf+dy+eplk+ylkkyre+
  XP_028556363.1  26 REQDRLLPMANISRIMRKAVPPNGKIAKYAKDSVQECVSEFIAFITSEASEKCLREKRKTINGDDILLAMVTLGFDDYIEPLKLYLKKYREV 117
                     89*****************************************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 120 aa     Download sequence    
MAEEMPASHC GGTHESDDES PRSFAREQDR LLPMANISRI MRKAVPPNGK IAKYAKDSVQ  60
ECVSEFIAFI TSEASEKCLR EKRKTINGDD ILLAMVTLGF DDYIEPLKLY LKKYREVITL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37060.13e-55NF-YB family protein