PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028556452.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family GRAS
Protein Properties Length: 113aa    MW: 12912.7 Da    PI: 4.9112
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028556452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS67.62.4e-21280208286
            GRAS 208 lqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvE 286
                     ++l +l de+vsles+ d+vL+++++l+P+v+v+   ++ +n++ F++rf eal ++salfd+le+++ re+e+r+ +E
  XP_028556452.1   2 YRLRNLADETVSLESPSDQVLRTIRKLNPNVFVLGVVNITYNAPFFVTRFKEALFHFSALFDMLETNVERENEQRRLLE 80 
                     68999**********************************************************************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MYRLRNLADE TVSLESPSDQ VLRTIRKLNP NVFVLGVVNI TYNAPFFVTR FKEALFHFSA  60
LFDMLETNVE RENEQRRLLE IVKEGDDDGG VAESLTHGPA VSAEVPVWRR SMT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.13e-30GRAS family protein