PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028556708.1
Organism
Dendrobium catenatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Malaxideae; Dendrobiinae; Dendrobium
Family Dof
Protein Properties Length: 219aa    MW: 23567.9 Da    PI: 6.4967
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028556708.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof106.61.3e-33254860
          zf-Dof  8 cprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                    cprC+stntkfCyynnys sqPr+fC+ Crr+Wt+GG+lrn+PvGggr+++++
  XP_028556708.1  2 CPRCESTNTKFCYYNNYSRSQPRHFCRVCRRHWTEGGTLRNIPVGGGRKNKRR 54
                    **********************************************9877665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MCPRCESTNT KFCYYNNYSR SQPRHFCRVC RRHWTEGGTL RNIPVGGGRK NKRRKITPTA  60
TSLAAAAGGN PIAPVVGEMK DPIFPDILRQ VLLHQPPPPP PPLPLESPCM DTLEGLFGAS  120
LPKTFLTFME DFSGVSSGLA LSAGEIPFMG AASTSHQNLS GVQDVSGGCG DGFLGMMDAS  180
AASIWVKKET VFPASYWDFW DGGAEDLNIG AVAETMLPE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-28Dof family protein